Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSICDMDINDMQKCRPAIT----GNNPPP----PVNDCCVVVRKANFECLCRFKF-----Y---LP--------IL-R--ID----PSKVVALVAKCGVTTVPRSCQV
1B1U Chain:A ((12-109))
-----IPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33004 for 395 contacts (-83.6/contact) +
2D Compatibility (PS) -6764 + (NN) -2339 + (LL) 804
1D Compatibility (HY) -400 + (ID) 600
Total energy: -42303.0 ( -107.10 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: