Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRASADRVALRLAPCVSAADDPQ------S---TPTSSCCSAVHAIGQSPSCLCAVMLSGTA---RA------------AG----I-K-PEVAITIPKRCNMADRPVGYKCGDYTLP
1B1U Chain:A ((16-110))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38234 for 415 contacts (-92.1/contact) +
2D Compatibility (PS) -6250 + (NN) 1081 + (LL) 776
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -45627.0 ( -109.94 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: