Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAGTECQNDVEVLKTTCYKFVEKDGPKLQPSPDCCTSMK--------GVNVPCVCTYLGSPGVR-DNINMDKVFYVTKQCGIAIPGNCGGSKV------
1FK5 Chain:A ((1-93))
--AISCG-QVASAIAPCISYARGQGSG--PSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTI-STSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25632 for 510 contacts (-50.3/contact) +
2D Compatibility (PS) -7674 + (NN) -1006 + (LL) 332
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -36330.0 ( -71.24 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: