Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APAGTTCEQLESVARSCTGYLKRSLIFLNDACCDGAESVYDALTTDAAVDLGFVCRCLRGFVISESLRPYLYRV-ANLPRLCRFKDRGPIPYNNSTIHDCRFSGTTRHSL
2WGO Chain:A ((-1-96))
-------------SLILDGDLLKDKLKLPVIDNLFGKELLDKFQDDIKDKYGVDTKDLKILKTSEDKRFYYVSVDAGDGEKCKFKIRKDVDVPKMVGRKCRKDDDDDDGY
General information:
TITO was launched using:
RESULT:
Template:
2WGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43558 for 687 contacts (-63.4/contact) +
2D Compatibility (PS) -9983 + (NN) -1206 + (LL) 804
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -56893.0 ( -82.81 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_2WGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WGO-query.scw
PDB file :
Tito_Scwrl_2WGO.pdb
: