Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVNPCVAYGL----GRAP-------IAPCCRALNDLRFVDSRNLRRAACRCLVGVVNRNP-------G---LRR---------NNRFQNV--PGDCRNNFVRPFWWRPRIQCNRVNLMDKLEYLDAEE
1BEA Chain:A ((15-108))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI-------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLAT----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54571 for 371 contacts (-147.1/contact) +
2D Compatibility (PS) -6110 + (NN) -1043 + (LL) 3076
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -61298.0 ( -165.22 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: