Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NRALTCGTVNSNVAPCIGYITQ----GGT------LPGACCTGVSKLNSMARTTPDRQQACRCLETAARALGP--N---------L---------NAGRAAGIPKACGVSVPFPISTNTNCNNVK
1B1U Chain:A ((15-109))
----------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39991 for 409 contacts (-97.8/contact) +
2D Compatibility (PS) -6443 + (NN) -843 + (LL) 880
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -50797.0 ( -124.20 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: