Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCSQVTSGLAPCLPYLQG--RGP------LGGCCSGVKDLLAAAKTPADRKTACTCMKSTANSIK---GI-D---------AGKAASIPATCGVNIPYKISPSTDCTKVE
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45229 for 389 contacts (-116.3/contact) +
2D Compatibility (PS) -6238 + (NN) -1340 + (LL) 1500
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -57807.0 ( -148.60 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: