Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVTCGQVTGSLAPCINYLRGNG----AG-------AVPQGCCSGIKSLNSAAQTTPDRQAACKCIKSAAAGIP-G----INYGIASGLPGKCGVNIPYKISPSTDCSRVK
1S6D Chain:A ((19-97))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLD--------EKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM---------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38513 for 408 contacts (-94.4/contact) +
2D Compatibility (PS) -6302 + (NN) 221 + (LL) 1400
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -47994.0 ( -117.63 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: