Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VNCGQVNKALSSCVPFLT----GFDTTP-----SLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYP-------N---IR----------EDAASSL--PYKCGVVINVPISKTTNCHEIN
1BEA Chain:A ((16-110))
--------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELAD---I-----PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46456 for 389 contacts (-119.4/contact) +
2D Compatibility (PS) -6398 + (NN) -1211 + (LL) 1396
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -56019.0 ( -144.01 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: