Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AIGCGTVVSYLNPCLPYVT----NKGPL-------GSCCGGVKGLYGAAQTAQDRQSVCSCLKSLAGSYK-------D---VD----------LNKAAGL--PGQCGVNIPYKISPSTDCSKVN
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52155 for 371 contacts (-140.6/contact) +
2D Compatibility (PS) -6214 + (NN) -1217 + (LL) 1484
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -61702.0 ( -166.31 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: