Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AITCGQVSSAIAPCLSYARG---TGSAPS---ASCCSGVRSLKSAASTAADRRAACNCLKNAARGV-------SGLN----AGNAASIPSKCGVSIPYTISTSTDCSRVN---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV--DASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42771 for 516 contacts (-82.9/contact) +
2D Compatibility (PS) -8276 + (NN) -3968 + (LL) 1088
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -60827.0 ( -117.88 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: