Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ANPCNPAQLTPCAGPA--LFGGAVPPACCAQLRAQ-----QGCLCGYARSPNYGSYIRSPNAA-RLFAICNLPMPRCR
1HYP Chain:A ((7-73))
--SCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS--
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32495 for 365 contacts (-89.0/contact) +
2D Compatibility (PS) -6223 + (NN) -4025 + (LL) 432
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -47811.0 ( -130.99 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: