Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVS----GRSPPP----PTKACCTALLSADLHCLCNYKSA--------LP--------AF-G--IN----PALAMALPKKCGGSLPPNCKVDAEP
1B1U Chain:A ((12-110))
-----IPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG-------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29765 for 406 contacts (-73.3/contact) +
2D Compatibility (PS) -7283 + (NN) -6570 + (LL) 720
1D Compatibility (HY) -800 + (ID) 750
Total energy: -44448.0 ( -109.48 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: