Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSVCNVPISGLMACKPAVT----P-PNPSAPTSACCSALTHADMRCLCSYKNSNVL------PSLG---------IDPNLALQLPPKCKLPRPNC
1HSS Chain:A ((12-103))
-----FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPI---
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24432 for 406 contacts (-60.2/contact) +
2D Compatibility (PS) -6476 + (NN) -3154 + (LL) -68
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -38180.0 ( -94.04 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: