Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSTTPDMEAFKLAPCASAAQDTT------S---PVSSQCCAQVKKMGQNPPCLCAVMLSN---TAKS------------SG----V-Q-PENAITIPKRCNIANRPVGYKCGAYTLP
1B1U Chain:A ((16-110))
---------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24842 for 408 contacts (-60.9/contact) +
2D Compatibility (PS) -6829 + (NN) -4138 + (LL) 648
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -39411.0 ( -96.60 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: