Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSSSSCTNVL---VSMSPCLDYIQ----GNSS--KP-------SSSCCSQLANVVRSQPQCLCEVLNG--GA-S----SL-G---VSVNQTQAMALPTACNVKTPPASQCNATIL
2LVF Chain:A ((7-107))
----ECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRM-MRLAENIPSRCNLS-P--MRCPM---
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27089 for 410 contacts (-66.1/contact) +
2D Compatibility (PS) -7581 + (NN) -269 + (LL) 708
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -39281.0 ( -95.81 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: