Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SEVPTSRGGMSPTQCKEKQRLLVNACSAVMFG-HSPSSDCCKHVR-LTQVQ---CVCPAITSKLAGLVGVEHTIKQIES-CGRTVPRNFKCGI-
1HYP Chain:? ((6-80))
-----------PS-CPD-----LSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRAL--GILNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41502 for 409 contacts (-101.5/contact) +
2D Compatibility (PS) -6879 + (NN) -222 + (LL) 1164
1D Compatibility (HY) -7600 + (ID) 900
Total energy: -55939.0 ( -136.77 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: