Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRTPIRSAAASLSPCLGAAGN----AKA---------KVPPACCSKVAALLKTTPKCLCAILLSPLAK------QA-G----IKPGIAIGIPKRCNIRNRQAGKKCGN
2LVF Chain:A ((16-101))
-------------QMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGM---DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS----------
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31509 for 342 contacts (-92.1/contact) +
2D Compatibility (PS) -5876 + (NN) 3760 + (LL) 872
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -36353.0 ( -106.30 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: