Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SACSSTFFSALVQLIPCRAAVA----PFSPIP----PNEACCNAIKALGQPCLCVLVNG--------PP--------IS-G--VD----RNMALQLPEKCTANFEPCDVMK
1B1U Chain:A ((11-109))
-------AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39634 for 409 contacts (-96.9/contact) +
2D Compatibility (PS) -6931 + (NN) -4499 + (LL) 744
1D Compatibility (HY) 0 + (ID) 700
Total energy: -51020.0 ( -124.74 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: