Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITD---FNCFCSMLLNQGTNLNQDYINNAL-LIPSKCGEQGRNL-RGQRCGNYAIP
1HYP Chain:? ((6-80))
PSCP--DLSICLN-ILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI-LN---LNRNLQLILNSC---GRSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50518 for 434 contacts (-116.4/contact) +
2D Compatibility (PS) -7012 + (NN) -2236 + (LL) 608
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -67308.0 ( -155.09 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: