Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVQCGQVTQLMAPCMPYLS----GAPGMTP----YGICCNSLRVLAELAATTADRVAACNCVRAAAGAG----GF-PP---VD----------FTRAAGL--PAACGLKINFAISPNMDCNQVTDEP
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS---------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54795 for 399 contacts (-137.3/contact) +
2D Compatibility (PS) -6882 + (NN) -1092 + (LL) 2124
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -62945.0 ( -157.76 by residue)
QMean score : 0.214
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: