Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------MMVAAQCDAGQLVVCAPAILGGAMPT--ASCCSKLREQEQQGCFCEYLRNPAYAGYINSQTARGAIAACNVTLPQCS-------------------------------------------------------------------------
3FRU Chain:A ((1-178))
AEPRLPLMYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAWIWENQVSWYWEKETTDLKSKEQL--FLEAIR--TLENQINGTFTLQGLLGCELA-PDNSSLPTAVFALNGEEFMRFNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLTSCPERLLGHLERGRQNLEW
General information:
TITO was launched using:
RESULT:
Template:
3FRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20749 for 292 contacts (-71.1/contact) +
2D Compatibility (PS) -7695 + (NN) -1578 + (LL) -160
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -32832.0 ( -112.44 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_3FRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FRU-query.scw
PDB file :
Tito_Scwrl_3FRU.pdb
: