Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTNVLISMAPCLSYVTGS-----SST----PSSSCCSQLASVVLSQPQCLCAALNG--GGA--SL------------G--LNI--NETLALALPGACKVQTPPV-SKCNGKFKNNFLPEI
1B1U Chain:A ((16-116))
---------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLS----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42480 for 450 contacts (-94.4/contact) +
2D Compatibility (PS) -6975 + (NN) -70 + (LL) 1436
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -52489.0 ( -116.64 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: