Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTS---------------YPGAQCCSSLTRFRGNPDCLCSTMLTARQQ------FTF-----SVPNAFTIPERCGYANEIPPHYKCGNYVVGH
1SM7 Chain:A ((14-100))
--------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ---------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40199 for 393 contacts (-102.3/contact) +
2D Compatibility (PS) -6044 + (NN) -36 + (LL) 352
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -48577.0 ( -123.61 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: