Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------SHNVGALASSCEE-SDFLYKSLPCVKGG----------TVMSTP----SSQCCVAVRAMALECLCRLIVSATGASSEQTVKNYVKTCKMKAPPGFKC----
1FJG Chain:J ((3-100))
KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRT-----HNRLVD--IINPNRKTIEQLM---TLDLPTGVEIEIKT
General information:
TITO was launched using:
RESULT:
Template:
1FJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8201 for 396 contacts (-20.7/contact) +
2D Compatibility (PS) -7623 + (NN) 573 + (LL) 976
1D Compatibility (HY) -800 + (ID) 750
Total energy: -15825.0 ( -39.96 by residue)
QMean score : 0.149
(partial model without unconserved sides chains):
PDB file :
Tito_1FJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FJG-query.scw
PDB file :
Tito_Scwrl_1FJG.pdb
: