Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLGVLLPCLPFLQGQ-----GSN----PTQPCCNGLETVVKLNPACLCALVNS---Q----LG--------------NRIN--ITLALSLPSLCNLAGVTI-DLCNPTGKFSFKI
1B1U Chain:A ((16-116))
------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLS--------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54914 for 439 contacts (-125.1/contact) +
2D Compatibility (PS) -6702 + (NN) 1689 + (LL) 916
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -63411.0 ( -144.44 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: