Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSSTS---------------------FPGAQCCSSLTRFRGNPDCLCSTMLTARQ------QFT---F--SVPNAFTIPERCGYANEIPPHYKCGNYVVGH
1PSY Chain:A ((26-116))
--------DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV-----------------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28961 for 399 contacts (-72.6/contact) +
2D Compatibility (PS) -5941 + (NN) 750 + (LL) 416
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -36486.0 ( -91.44 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: