Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---ACDATNNM-GKLLPCRQAAVK-----NGKDPKQLAGCCDAVKPFSGSKDAADCLCQSLLAAQKVDKTVDLHSAIAIPAKCGIPVQANLNCNGMAVPQH-----------------------------------
1HE1 Chain:A ((1-135))
ASSAVVFKQMVLQQALPMTLKGLDKASELATLTPEGLAREHSRLASGDGALRSLSTALAGIRAGSQVEESRIQAGRLLERSIGGIALQQWGTTGG-AASQLVLDASPELRREITDQLHQVMSEVALLRQAVESEVS
General information:
TITO was launched using:
RESULT:
Template:
1HE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10711 for 584 contacts (-18.3/contact) +
2D Compatibility (PS) -9844 + (NN) -4862 + (LL) 208
1D Compatibility (HY) 400 + (ID) 750
Total energy: -25559.0 ( -43.77 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1HE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HE1-query.scw
PDB file :
Tito_Scwrl_1HE1.pdb
: