Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GPYCRDVVETILPCIEYIT----TPGAST----LPAPCCNGMKSLNGEPQYVCRCLKETFFVLP-------G---LN----------LAALAAL--PKNCGVNLPYQITPDMNCDKVN
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPA--YCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60475 for 401 contacts (-150.8/contact) +
2D Compatibility (PS) -6927 + (NN) -2746 + (LL) 744
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -72854.0 ( -181.68 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: