Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EEKAACV--VTDLKACLPDIIGETP-PSTKCCTKLKDKKSCFCEYLKNPL------------IAPY----MTSAKQVLEACGVPVP-------VCQRF-
1FK5 Chain:A ((1-93))
--AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13790 for 357 contacts (-38.6/contact) +
2D Compatibility (PS) -6572 + (NN) -3309 + (LL) 592
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -25029.0 ( -70.11 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: