Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSE-KKPRLISFNGRTFDIPVLKYRAMVHDVQAEYFHKAGD---KWNS----YNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAV-FNLPGKIGVDGSQVVDLYDSG-RIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
1QHT Chain:A ((186-328)) | --------------------------------------------------------------------------------------------TEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFT--LGRDGSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGK-PKEKVYAEEIAQAWESGEGLERVARYSMEDAKVTYELGREFFPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYKRNELAPNKPDER |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42492 for 844 contacts (-50.3/contact) +
2D Compatibility (PS) -13648 + (NN) -847 + (LL) 6460
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -61277.0 ( -72.60 by residue)
QMean score : 0.293
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