Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEHLNLFSLENSDYIYADYNATFPVSDSVKESILEVLSKQVLNPSSLHRKGQEARRILQDARDNIRSAIGVPSNKEIVFTSGATEANSLVMKGIAGFQH-----------VISAVEHPSIL--------NSACNPHIIPVNQGGIVDLLALERILSELKGNRVIVSVMMANNETGVVQPVKEIAEIAHKFETI----------YHTDAAQSVGKIKVNMEDLGMDLLTLSAHKFGG--IAGSGVLIFNKDLVIEPIIVGGGQEKGLRGGTENIVAIAGLSAALQSIS-NLLSKMDEIKELRDQLEYELLNLASGIKIFGKNSK-----RLPNTSLIYMPGVKSDVQLMNFDLNNIAVSNGSACSSGKVE-PSHVLLAMGATREQAECSIRVSIGPQTKPRDIRKIVDCWYNIYEKNILDMRK |
| 3A9X Chain:B ((20-418)) | ----------------VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIG-GKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSK--VNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLE-ERLEAEFGKRIH-LNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131345 for 3065 contacts (-42.9/contact) +
2D Compatibility (PS) -38494 + (NN) -16932 + (LL) 900
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -213871.0 ( -69.78 by residue)
QMean score : 0.474
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