Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSTDYNINLTDSALKKIHSLVEQEEDKSSILRVAVSGGGCSGFKYNFLMDQIDKNLSLSDDDDDDEFDDEDDDDDESEDYRSRSSFSRKSKDIVINDKDGNPVLMVDNCSVKFLNNSIIDYTENLSGSGFQVKNALAKSQCGCGNSFSV
1NWB Chain:A ((2-101))
QEQAQQFIFKVTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAM------------------GFDDTVEEGDHVFEYD-------------------GVKVVIDPFSMPYVNGAELDYVVDFMGGGFTIRNP--------------
General information:
TITO was launched using:
RESULT:
Template:
1NWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22857 for 678 contacts (-33.7/contact) +
2D Compatibility (PS) -10738 + (NN) -6106 + (LL) 1316
1D Compatibility (HY) -9600 + (ID) 1450
Total energy: -49435.0 ( -72.91 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1NWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NWB-query.scw
PDB file :
Tito_Scwrl_1NWB.pdb
: