Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWFYKLP---STNILDTQLTDVTTAPVVKLNILIITSNSTVVPV--------------DVEL---GNLLCLQVMQA--RNISDGIMWGYTGAVILHVI-------------
2HJQ Chain:A ((1-111))
MFTAKLIKGKTYNVMGITFRAGVSQTVPKKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGRNPSDFKNADERIAYILKQIDNKGELEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46598 for 436 contacts (-106.9/contact) +
2D Compatibility (PS) -8488 + (NN) -3689 + (LL) 0
1D Compatibility (HY) -400 + (ID) 850
Total energy: -60025.0 ( -137.67 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: