Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHKILILLLIILPIKLLAVEIEIIADVNGEPISNLDIEKRINLTHSLFGTQSIDKNELKLQILKQLIDEIIIINEAQRLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLLWDKIIEVRIVPFINISDKEVNNAKGQIEKPDYLITFQEFIIPNQK-----------------DADVYGIAEDLVEKLRNN-NN---DFIPEAPIKMR----K-VTVNLNQLKGNLKSILEGLKTGDIAGPVSSSEDYSIVKVIDKVQLDHAMLESTLKLKQIVVKDSESLLDNLKEQKVNCLNFDELADNFNLPNAKEFEIKMRDLNPDLQALFSKTSVNEIIESRENSTARLMMLCDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
2LJ4 Chain:A ((9-117)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------RAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRSDCGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHIIKRLA---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25501 for 571 contacts (-44.7/contact) +
2D Compatibility (PS) -8595 + (NN) -2361 + (LL) 25740
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -13967.0 ( -24.46 by residue)
QMean score : 0.565
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