Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------MQDSNASCNTGPFYKGVIKFLNQFQSRVNSEQSREDYVKESIIIS--------LEDAISPFY--SLVDKGVCYTIPNSERITLLDICVNQLVDNHRKIVHGVILLLSRLRRNRKSMLFNDKYFC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4K70 Chain:A ((2-483)) | PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATLYDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEF-----FHDRQNPTLREQFAEAARAVDEAALVPVGEVNATPRTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGVLALLDPGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22525 for 624 contacts (-36.1/contact) +
2D Compatibility (PS) -10817 + (NN) 523 + (LL) 520
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -38299.0 ( -61.38 by residue)
QMean score : 0.360
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