Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSGI-MQGKYE-FLNEENTKVFEVTIPSFSLDSPYTNIRPH-----
1TZA Chain:A ((3-134))
------ALDNSIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGIMY-GTYGMVSESGEH--FNAIIKPFRLATPGLLHLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
1TZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39396 for 827 contacts (-47.6/contact) +
2D Compatibility (PS) -13846 + (NN) -4433 + (LL) 1060
1D Compatibility (HY) -4000 + (ID) 2450
Total energy: -63065.0 ( -76.26 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1TZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZA-query.scw
PDB file :
Tito_Scwrl_1TZA.pdb
: