Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKGIITNIGTIINTTIRSNSDQIFHIK-A-QNLSSIHEGDSIACSGVCLTVVDIINDIFTVQISQETMKVSNLGAWKVGKKINLEQAMRLSDKIDGHLVHGHVDETAKILTINQNLGSHEIKLSCPQELIKFVAKKGSVTLDGVSLTVNSVIGREFTVNIIPYTWQ-NTTFQYNKVNDYLNLEVDMIARYLDQLIQYKYN
3A35 Chain:A ((1-184))
MFKGIVQGAGIIKKISKNDD-TQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISGDVVYFDI-DQAINTTTFRELEVGNKVNLEVRPEFGSLLGKGALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIFINY-PKNLSITTNLGTLEKGSDVNVETLN--------------
General information:
TITO was launched using:
RESULT:
Template:
3A35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103310 for 1439 contacts (-71.8/contact) +
2D Compatibility (PS) -19014 + (NN) 1028 + (LL) 1576
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -132920.0 ( -92.37 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_3A35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A35-query.scw
PDB file :
Tito_Scwrl_3A35.pdb
: