Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRP----ALTNIENCITNNSGISMAGCIASAYSAGFACLSED----EKELGTAIVDIGGGCTAIGIFK--RSKLIY---ANSIPIGGVHITRDIAYGLCTS-------------------IEHAERIKILYGSTVVTSIDENEYITVQSNE--NDEQARIPKSELVDIIRPRIEEILELVKEQFRK---QKDPINKVVITGGTSRLASMKEIASYIFNK-QVRIGCPESYGGLDGEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
| 3I33 Chain:A ((160-401)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------SAVITVPAYFNDSQRQATKDAGT-ITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQ------ASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELN--K-----------SINPDEAVAYGAAVQAAILI--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109211 for 1561 contacts (-70.0/contact) +
2D Compatibility (PS) -21826 + (NN) -6275 + (LL) 12892
1D Compatibility (HY) -3200 + (ID) 2100
Total energy: -129720.0 ( -83.10 by residue)
QMean score : 0.442
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