Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEFEIEPLLKDKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRVAEGTGFPHYILNYEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQV-TRNLGADVLITGHYVRRLEKNGEVKLCRGIDKSKDQSYFLFATTKEQLKLLRFPLGGFYKCNVRKLARYFSLPISEKPDSQDICFVSENYSKTIAKLAPQSIQKGKIVDVNGKVLGEHNGIVNFTVGQRKGLGIA-----YSEPLYVVRINTKNNEIVVGPVN---ALMQRKILVKELNWLEQPKK--GMEVTVKLRSLHSGSLAKIYPAKEQNKAYVILNDDYFSISPGQACVAYKDEQVIGGGWICS |
| 2DER Chain:A ((17-374)) | -----------------AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGE-----EYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLV---------------KFREFLGRYLP--AQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDD-DRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180851 for 2688 contacts (-67.3/contact) +
2D Compatibility (PS) -35645 + (NN) -7721 + (LL) 2672
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -251445.0 ( -93.54 by residue)
QMean score : 0.426
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