Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIVVLSGYGLNCEKETAFAFVECGRKLGVNNIEVRIVHINEIIKNPGELRLSNILAIPGGFSYGDDTGAGNAFALRVKNNLLDKFQEFLSQDKLVIGICNGCQILAKLIPEFSNLALIRNDIGNYQCRWIKVKVSPQSSSVWLQDL-NELYLPIAHGEGKFFMNQGVLDQLIENNSVALRYINESGDYANLQFPYNPNGSTYDLAALSDKSGRVLALMPHPERGIFFTQQDNWPLEKEKCKRLKIAMPKYGDGMLIFENALRYFC |
2VXO Chain:A ((30-200)) | GAVVILDAG--YGKV-IDRRVRELFVQ-------SEIFPLETPAF-AIKEQGFRAIIISGGP-------------AP---WFDP---AIFTIGKPVLGICYGMQMMNKVFGGT----VHK---------VFNISVDNT--CSLFRGLQKEEVVLLTHGDSVD--------KV-ADGFKVVARSG---------------N---IVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101837 for 1227 contacts (-83.0/contact) +
2D Compatibility (PS) -16029 + (NN) 589 + (LL) 2000
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -122577.0 ( -99.90 by residue)
QMean score : 0.352
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