Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIKIAPSILSANFAKLGEEVKRINNLGVDYIHIDVMDGNFVPNITIGPGVISTIRKYTNLFFDVHLMIKSPGDHVESFINAGADIITIHAEAEVHLERLIRKIKSYKNVNDAKKKVQVGVSIVPSTSPGIFEYIIHELDIVLIMTVNPGFGGQEFIYSQLGKISVVKKMIRERGLKTQISVDGGVSLSNAADIIKAGADILVAGSAIFRAKNMKKAVNDFKNLSL
2FLI Chain:D ((4-216))
--LKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKA--------AGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTAL-
General information:
TITO was launched using:
RESULT:
Template:
2FLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -198685 for 1866 contacts (-106.5/contact) +
2D Compatibility (PS) -22952 + (NN) -9292 + (LL) 532
1D Compatibility (HY) -21200 + (ID) 4800
Total energy: -256397.0 ( -137.40 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2FLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FLI-query.scw
PDB file :
Tito_Scwrl_2FLI.pdb
: