Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MEAYMLASNSTETILVADQ--------NIYNSSASNNPALNTQDLSGSTPDKDKYVTLNSKEEWDKFFKLQNNPSTNITNKVRTKPHVRKNSNGMYRYTAEENKYNGKEIIGKVAEQIKEEISQKIKSDTMKLVKLKESKNEDNSVKPAIRIVL--NDNVKEINMADLLSGSVCKEYNVKAITFCFPDKSNTRGIRCRIDEHGT-----RIYEVANGSYEMDLRWYCEGKECKIKILMKDDGSIRLIEDNGIT-----EEQLKA------------H-KEIRVGRQYEAKSLHEALALQLPQLQ--------QKCSETTEILSRLADVSTSQAQQVLSAQVSK |
| 4USR Chain:A ((1-357)) | GPAMPPILDVIVIGGGQAALTTAYFLRRTSLSYLLLDEQPGPGGAWLHAWDSLRLFSPAAWSSIAGWPMPSPTEPGNPTRNDVIDYLRRYEDRYQFPIQRPVRVDTVTRLDD--LWRVQAGDQQWLARAVISATGTWSKPFIPPYEGRELFQGAQIHSAHYRTPAPFAGKRVMVVGGGNSGAQVLAELSSVSETLWITQEPPAF-LPDEVDGRVLFERATARWKAQQEGRSIDEPAGGFG-DIVMVPPVREARERGVLVAERPFARFTETGVEWADGRRENLDAVIWCSGFRPALDHLRELGVVEADGKVQVEDTRVVKQPNLWLVGYGDWTGMASATLIGVTRTARSTADQVVQALTATP-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 69131 for 2073 contacts (33.3/contact) +
2D Compatibility (PS) -30901 + (NN) -3105 + (LL) 48
1D Compatibility (HY) -2800 + (ID) 2600
Total energy: 29773.0 ( 14.36 by residue)
QMean score : 0.079
|
|
|