Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPA--KDILL-QSSFLFVRGNHENCDRAYEGWFRYLDSHPFSSEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLTQDSSDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
| 3RL5 Chain:A ((13-293)) | VTITVD-----EYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTP-------------------------------------------------KPAGHTRFVCISDTR--------------------SRTDGIQMPYGDILLHTGDF----TELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWGWGFNLPRG-QSLLDKWNLIPEGTD----ILMTHGPPL--------------------GFRDWVPKE--LQRVGCVELLNTVQRRVRPKLHVFGG----IHEGYGTMTDGYTTYINA------------------STCTVSFQP-----TNPPIIFDLPNP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99065 for 2378 contacts (-41.7/contact) +
2D Compatibility (PS) -29438 + (NN) -13348 + (LL) 8388
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -140713.0 ( -59.17 by residue)
QMean score : 0.293
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