Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MFIG-----NRNRNKVERAISEIRRGLPIIIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRK---EHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSL--SCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTR-CLPLIMERNKYNDSYIETKFSRLGHRLRTF |
| 4ONQ Chain:A ((7-353)) | RLPKPMIGFGVPTEPLPAMVRRTLPSQAVGPPFFYYENVALAPKGVWDTISSSLYD--------IEPEFVDSKYFCAA-----ARKRGYIHNLP--------VENRFPLFPLAPRTIHEA---LPLSKKWWP-------SWDPRTKLNCLQTAIGSAQLTNRIRKAVEDFDGEPPMRVQKFVLDQCRKWNLVWVGRNKVAPLEPDEVEMLLGFPKNHTR-----GGGISRTDRYKSLGNSFQVDTVAYHLSVLKDLFPGGINVLSLFSGIG---GGEVALYRLG-------IPLNTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFNDVQQLNGDRLEQLIESFGGFDLVIGGSPSLFSSYVRILDLVKSIMS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ONQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44546 for 2474 contacts (-18.0/contact) +
2D Compatibility (PS) -32943 + (NN) -12082 + (LL) 4016
1D Compatibility (HY) -12000 + (ID) 2250
Total energy: -99805.0 ( -40.34 by residue)
QMean score : 0.241
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