Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEFIVRKNALLNIGKESTLPLALLTTITVGCYLSWWIVAFNIVCEYVVYKLASHYMAKYGNSEISTYGFMNKMNYIALGSKPLFTYLIAAFSVYLLTTNFIANGLTVGVGILGSLLALAILIEVLAPVFSRGCKIYAEKHTRDLLDEGPKD-RVQKETDLLGEYGT
2XZ8 Chain:A ((7-141))
--VKIVTRPYWLAQPPIVPLTPLKLPIESVRFVATNTPSCFTQAECTFRVRLLQNWHIESNGYKDINY-------NFVAAGDENIYEARG-----WDHSCEPPKDADELVVAFIGP-------------------SSSNKKIALELIKQGIKLGHISKNYSLIDDLEK
General information:
TITO was launched using:
RESULT:
Template:
2XZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95697 for 1053 contacts (-90.9/contact) +
2D Compatibility (PS) -13595 + (NN) 4475 + (LL) 3452
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -102015.0 ( -96.88 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_2XZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZ8-query.scw
PDB file :
Tito_Scwrl_2XZ8.pdb
: