Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIISLNNNSCSVEIKKKLLSIITKVIEKNTWTQAHAAERLGVDQPKISQIKNGKTDGFSLERLLGFLKKFDHEITITITESQAVKPETEKVKREVGSP
2R1J Chain:L ((4-67))
----------------QLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETE-PNGENLLALSKALQCSPDYLLKGD-----------------
General information:
TITO was launched using:
RESULT:
Template:
2R1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24623 for 447 contacts (-55.1/contact) +
2D Compatibility (PS) -6938 + (NN) -2387 + (LL) 2148
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -34500.0 ( -77.18 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2R1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R1J-query.scw
PDB file :
Tito_Scwrl_2R1J.pdb
: