Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISKFVFLFLFCLGFNLQASGTLNIEEVITRKGFKFLFVENCDLPKVSLNISFKDAGYAYENVEKQGLTWFTSLAIQEGAGKNDA-KDFAKKL-EDKGISLNFIAGLE----AFRASLNTLS-------ENLEEAVSLLSDAIMHPK-----VDLEGLNRAFEKAKVNFNNLEKDPYFIAGKELNTLLFK-KHPYSKSEYGILDTIMSITRDDVLAYVKRNFTKDNIVISVVGCTTKEEVSALLDKYLSKLPLKRSKVRKIPVKNNFGPAESKNIFMDIPQSVIFFAQKG-IAYEDPDYYSASVLINALGGMGLNSILMKELRQNLGITYGVFAHIIPNKHGNAIVGNMSTDSSTAGKAILAVKDTLSRIKREGIDEQLFKDAKTILVNNLTFFLSNNTNTAMLLDDMQINDRDVNRINNYADIINDVKLEKVNELASSLLDPENLFFVKVGRNT |
| 3D3Y Chain:A ((2-421)) | ------------------------NAMSVQLVKGVNLHVIPTEKYKTVRLLVRFN-TRLNHETI---TKRTLLSSLMETNSLNYPNQVKLSERLAELYGASFGIGVSKKGNQHWFNISMNIVNDHYLQDSQVLAEAVDFLKEIIFAPNIQAGQFEAETFQREKENLKAYLESIVEDKQTYASLALQSVYFNQSEDQKIPSFGTVAALAEETAASLAAYYQKMLAEDQVDIFVLGDVNEAELVPLFKQLPFTPREEGKAA-IFYNQPIRNVIEERTEREVLAQSKLNLAYNTDIYYGDSYYFALQVFNGIFGG-FPHSKLFMNVREKEHLAYYASSSIDT--FRGFMTVQTGIDGKNRNQVLRLISTELENIRLGKIRELEIEQTKAMLKNQYILALDNAGAWLEKEYLNELMPQTMLTAEEWIARINAVTIPEIQEVAKRLELQA--IFFLEGETE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124408 for 3186 contacts (-39.0/contact) +
2D Compatibility (PS) -43504 + (NN) -20763 + (LL) 2764
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -204461.0 ( -64.17 by residue)
QMean score : 0.442
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