Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIALKYRPGSFKDLVGQDILVRILENAFTLNRIPQSILLSGASGVGKTTTARIIALCLNCSLGPTFEPCGSCKNCLTIKNSSHPDVIEIDAASHTSVDDIKVILGDICYSPISSKFKVYIIDEVHMLSSSAFNALLKTLEEPPPSVKFILATTEIKKIPITIIARCQRFDLYNIPVAKIVERLNDIAQRESYFIEKEASELIARHSGNSMRNALFLMNQAVLYNKGGVISTKSVMDILGLVDKDIIFDLMEAILGSDLQKALSLFDKA----VETANPLSIFEGLLQTIQLICRFLVTKEIDSSVTECEKNRIKDLGVKKSLIFFSRLWRMLLKGVQDIKASTCSDVAAEMILI-SLCYLSDLPSPEQVVKKVLAQSTQQRNTRSAENIQQKSYDFDKILQLLQQNNQIYLYKQLCSNLQLVNCKPGYLKLKAVSQLDSNFCNDLKNYLSQITQQEWVITIDAGYIKKGASSLSYAPAVKGILDTFKGAKVVNIENKE |
| 3GLI Chain:D ((28-385)) | --LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQV-STQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIEL---RMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRM--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240239 for 2800 contacts (-85.8/contact) +
2D Compatibility (PS) -37823 + (NN) -20578 + (LL) 9936
1D Compatibility (HY) -24000 + (ID) 6900
Total energy: -319604.0 ( -114.14 by residue)
QMean score : 0.523
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