Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMIFRLLFLLVFISVNSYAVIKQDLSNNHYIQKINEITSKELLLPLPDDKLLGDSKAPILMIEYASLTCYHCSLFHREVFPEIKKKYIDTGKMLYIFRHFPLDYRGLKAAMLSYCYEKQEDYFNFNKAVFNSIDSWNYSNLSDLTVLQKVAALSNLKQDTFNRCINDKEVMDKIINDKSLAINKLGIMATPIFFIKLNNDRSHTEPNKIRHEGYKAQEYFTNVIDRLYEKAIVK
3H93 Chain:A ((13-187))
--------------------------------------------VELSSPVPVSQPGKIEVVELFWYGCPHCYAFEPTIV-PWSEKLP--ADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKE-HKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKA-KKLAMAYQVTGVPTMVVNGKY---RFD-----IGSAGGPEETLKLADYLIEKERAA
General information:
TITO was launched using:
RESULT:
Template:
3H93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108105 for 1353 contacts (-79.9/contact) +
2D Compatibility (PS) -18541 + (NN) -9261 + (LL) 4640
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -135167.0 ( -99.90 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3H93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H93-query.scw
PDB file :
Tito_Scwrl_3H93.pdb
: